rs29339128 SNP Detail

Summary

• ID
  rs29339128
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:42404833 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAAAGTTGA AAGCTGCCCA
  GACTAGCATC CAACTCACCT TGTAGCCCAG CCAGGTTTGT CTTTCAGCTC CCGTGCCATT
  GTACCGTATG TGCAGCATTT CATTCTCCTT CCTGCCCTCA GTGTGAGCAA CCCACGGCTC
  TCCGGTGCTG CTTATCACTC TTAGCCGTGT TGGTCGCGTA GGGAGTGAGT GGATCACTGG
  R
  CTTTTGGTGT CCATTTGGTG GCCAGTGTTG CTGCTGACCT TTTTTTCATT TACTCCTTGA
  GTCTGTGCTC TTTGGAGAAA AGTGGACTGA GATATTTTGT CTGTTTAGTT GGGCTGCCTT
  TTTATTATGT TGTACTGTCT AAAGTGTAAA ACAGTAACTC CAGGTTCCTT ACCATCTATC
  TATCTGCTCT GCAGTCTTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38560842	mCV23303298	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss147079718	ENSMUSSNP706000	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29339128					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:42404833 () rs orientation: forward

Symbol	Name	Function Class
Rr219442	regulatory region 219442	833 bp distal
Rr219443	regulatory region 219443	1768 bp proximal
Snx3	sorting nexin 3	within coordinates