rs29339860 SNP Detail

Summary

• ID
  rs29339860
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:3672786 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAGCTGTG GTTCTGACTT
  CAGAGGGAAT CAAACTGATT TAGGGGAGAA TGATCATTTG GGGGAAGCAG TGCTTGGCCC
  CCCTGGCTGA AAGCACAGTG TCCCATTCAC TGAGCTGATC CTAAAAGGAC TCAAAAAGCA
  GCTACTGCAA TTTAGGGCCA GTTGATGGAT TTAAGGGCTG CTGGCTCTTT GTTGAAATGC
  R
  TATTAATAAA GAAGAGGGCT TTATAAAAAC TCACTGTTGC GTACAGGGAT CCACAAGGGA
  TCACAGTGCA ATGATTATTA TATTCACACA ACTAAAGAGG TAGGTAGAGT GGGTTCCCTT
  GTGTTGGGCT TTGCATTCTT AAAAGGAAGT AGGCTTTGGA AGAACTTATC CATAAAATCT
  GCAGAATGAA CTCAACGCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss38568382	mCV25387156	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss146748581	ENSMUSSNP1244606	ENSEMBL	ENSEMBL_Sanger	r	SNP			T
ss323242459	CHEV_10_6623755	CHEVERUD	SCREENING_POP	r	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs29339860					SNP	G	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:3672786 () rs orientation: forward

Symbol	Name	Function Class
A330032P22Rik	RIKEN cDNA A330032P22 gene	within coordinates
Gm30164	predicted gene, 30164	within coordinates
Gm56946	predicted gene, 56946	within coordinates