rs29342226 SNP Detail

Summary

• ID
  rs29342226
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:68052959 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGAGCAATTA AGGATAGTTG TGCTGGGTAT AAAATGAAAC
  CAGATTGAAT TTTGGATTTC TTTGTAGTTT TAAGGGTATG GGAATGTTAA GGACAGGGAG
  M
  TAGGGACTCC AGGAAAAATC ATGGCTCTGA GAAAGAAAAT CCAGGCCTGG CTTTTTAAAA
  TAGATTTTAC AGAACTGGGA ATATGGCTTA GCACTTAGA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	LG/J	SM/J
ss38571720	mCV24237452	ABI	CRAMUS_MOUSE	f	SNP	A	C
ss147148769	ENSMUSSNP6024938	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss323352181	CHEV_10_67679877	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	LG/J	SM/J
rs29342226					SNP	A	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:68052959 () rs orientation: forward

Symbol	Name	Function Class
Arid5b	AT-rich interaction domain 5B	within coordinates
Gm51770	predicted gene, 51770	within coordinates
Rr433221	regulatory region 433221	1626 bp proximal
Tssr98005	transcription start site region 98005	1719 bp downstream