rs29342576 SNP Detail

Summary

• ID
  rs29342576
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:8858439 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATTCATTTT TATTCTTTAC
  TGGTGTGTGT GTGTGTGTGT GTTTGTATAC ATGTGTATGT GGGTGCCCAT TGAATTCAGA
  AGAGGGCACT AGACCCTTGG AGAAGGTACC ACAGGCAGCT GTGGGCCATC CAATGTGGGG
  ACCTCTACAT GAGCAGTTTG TGCTCTTAAC CAATGAGGAA CCTCGCCAGC TTCTGCAGAC
  S
  TGCACTTATC TGTCTATTTA TATCCCTGTT ATGTTCATTT ATTCTCATCC CCTGTATGAA
  GCATGTCCCA GGGATGAGAG TCATTTTACA TTTTTATATC TTCATTTCCT CACAGAGGAG
  TGTTTTTTCA GAATATTTAA GTTAAAGATA TTAGTTGAAT GAATGGCTTT TGAACCAAAT
  GGATACAGTT TGCATTGAGT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss38574290	mCV25039715	ABI	CRAMUS_MOUSE	f	SNP	G		C	G
ss146769178	ENSMUSSNP805791	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C
ss323246163	CHEV_10_8702493	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29342576					SNP	G	C	C	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:8858439 () rs orientation: forward

Symbol	Name	Function Class
Rr223851	regulatory region 223851	162 bp proximal
Rr223852	regulatory region 223852	639 bp proximal