rs29343699 SNP Detail

Summary

• ID
  rs29343699
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:82330011 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTGCTGAC ACTATTGCAT
  ACACTAGCAA GATTTTGCTG AAAGGACCCA GATATAGCTC TCTCTTGTGA GACTATGGCA
  GGGCCTAGCA AACACAGAAG TGGATGATCA CAGTCAGCTA TTGGATGGGT CACACGGCCC
  CTTATGGAGG AGCTAGAGAA ATTACCCAAG GAGCTAAAGG GAACTGCAAC CCTATAGGTG
  R
  AACAACAATA TGAACTAACC AGTACCCGGG AGCTCTTGTC TTTAGCTGCA TATGTATCAA
  AAGATGGCCT AGTCGGTCAT CACTGCAAAG AGAGGCCCAT TGGACTCGCA AACTTTATAT
  GCCCCAGTAC AGGGGAACAC CAGGGCCAAA AAGGGGCAGT GGGTGGGTAG GGGATTGGGG
  GGGTGGGTTT GGGGGGACTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38576542	mCV23602892	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29343699					SNP	A	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:82330011 () rs orientation: forward

Symbol	Name	Function Class
Gm1553	predicted gene 1553	1559 bp upstream
Tssr98669	transcription start site region 98669	1629 bp upstream
Tssr98670	transcription start site region 98670	1552 bp upstream
Tssr98671	transcription start site region 98671	1532 bp upstream