rs29345171 SNP Detail

Summary

• ID
  rs29345171
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:44234899 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCTCCCCGT TGTTTTTTTT
  TTGTTGTTGT TGTTTTTTTT GTTTGTTTGT TTGTTTGTTT TTGAACAATG CCACCAAATA
  ATTAGAGGCT AAGTTCTTAT AACCTCTTGG CTGCCAATCA CATAATTAAG TCCATATTAT
  TTTATAGCTC TTGGTGGATA TCTAGTACCA AAGAATTAAC TTCTTACCAT TCTTGACAGC
  M
  TAGTCCTCCC CTTCTCTGAC CCCCTTTCTT AACCTGCTCT CCCACTGACT CCCCCCACCC
  TCACGGTCTT CTGTAGCCCC GCCTGGGCTG GAATTCGCTG TGTGACCTTG AACTCTGGTT
  CTTTGGTTTC TACCCGCTGT ATTGCTGGGA TTCTGAATGT GCGCTGCTAC AGCCAACTTG
  GGCAGTGCTA GAGATCTCAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss38580516	mCV23013879	ABI	CRAMUS_MOUSE	f	SNP	A	C
ss147093280	ENSMUSSNP1694025	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs29345171					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:44234899 () rs orientation: forward

Symbol	Name	Function Class
Atg5	autophagy related 5	within coordinates
Mir1929	microRNA 1929	773 bp upstream
Rr227725	regulatory region 227725	700 bp distal
Tssr93169	transcription start site region 93169	505 bp downstream