rs29345489 SNP Detail

Summary

• ID
  rs29345489
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:91909135 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAGCC TTTCAAAAAT AAATAAATAA
  W
  TCTGAGGTGC CTATTTACCA ACTCC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38577761	mCV24971756	ABI	CRAMUS_MOUSE	f	SNP	A	T	A
ss323389594	CHEV_10_91536018	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29345489					SNP	A	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:91909135 () rs orientation: forward

Symbol	Name	Function Class
Gm55043	predicted gene, 55043	1458 bp upstream
Gm55044	predicted gene, 55044	1896 bp downstream
Mir135a-2	microRNA 135a-2	1088 bp upstream
Rr437068	regulatory region 437068	1815 bp proximal
Tssr98922	transcription start site region 98922	1169 bp upstream
Tssr98923	transcription start site region 98923	117 bp downstream