rs29346188 SNP Detail

Summary

• ID
  rs29346188
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:3671265 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTGGGTAC TCTTGGAAGG
  CAGGCTGGGG CTGAAAGAGA CTAGACCTCG AGAGAAAATA ATGAGGCCAA GACAAGTTTT
  CTCTGATCAA GGCCTGTGAG TTTACTAAGA GACTGCTTAT AAAGGGGGAA GGCCCACCCT
  CTCCCTCCCC ACCCCCCACA CCCCCAGTCC ATCCTTGGTG CTTTGTCACC ATGCTGTCAG
  S
  ACTTGGTCGC CAGGCTGTTG CTTATTCAGG AAGACAGGTT CAGCCTCTCA GCAGGTAGCA
  GCATCTCAGA GAAGAGCAGG GCAGTTGTCA CTTCAAAAGG AAGCCAGCCA AGTAGGAAAG
  CTGCACGGCA GGTGGCCCCA CCTCAGTGGC GACAAGGTCT GCACCAGCCT GCTTCAGGCT
  GGGGAGGCTA CACCCTGGAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss38580934	mCV25387208	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	G
ss146748627	ENSMUSSNP3396724	ENSEMBL	ENSEMBL_Sanger	r	SNP			G
ss323242475	CHEV_10_6625276	CHEVERUD	SCREENING_POP	r	SNP					G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29346188					SNP	C	C	C	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:3671265 () rs orientation: forward

Symbol	Name	Function Class
A330032P22Rik	RIKEN cDNA A330032P22 gene	within coordinates
Gm30164	predicted gene, 30164	within coordinates
Gm56946	predicted gene, 56946	within coordinates
Rr219187	regulatory region 219187	within coordinates
Rr227319	regulatory region 227319	937 bp proximal