rs29348719 SNP Detail

Summary

• ID
  rs29348719
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:68001103 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATGCATGTG AATATATCTG
  AATATATCTA TTCATAACAA ATCCATGATC CCAGCTCACT GCCACAAGTG CTCATTAACA
  ACCACCACAA ACTCACAGTC AGTTCTGTGA GCTTTGAACC AGTTCCAGAA CCAGGGCTAC
  AGCAAGTGGC AGTTTGGCCT TTTCGCTTCT CTGAAAAAAA AAAAAATTTT TTTAACACCT
  W
  AAAAAATTCC CCATAACTGC TCCCTTCACA CCTTTTATCT CCTTCCTAAA TCCAAAATAT
  TCACTCACTA AATCTCCAAG GTTGCTGTGT TCTTATGTAA TACGTAATTT TCTTCGTGTC
  TCTGGTGTTG GCTTGTGAAA TGCCTTTAAT TAAAAAAGCT AAAAGCTCTC TAAATCTGGA
  TGGCAGACTC ATTTCCAGGG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38583870	mCV24109781	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	T	T
ss147147258	ENSMUSSNP1706976	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
ss323351846	CHEV_10_67628021	CHEVERUD	SCREENING_POP	f	SNP						T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29348719					SNP	A	A	A	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:68001103 () rs orientation: forward

Symbol	Name	Function Class
Arid5b	AT-rich interaction domain 5B	within coordinates
Gm51770	predicted gene, 51770	within coordinates
Gm66190	predicted gene, 66190	within coordinates
Gm66212	predicted gene, 66212	within coordinates
Rr401964	regulatory region 401964	76 bp upstream
Rr433213	regulatory region 433213	within coordinates
Rr433214	regulatory region 433214	146 bp proximal