rs29349397 SNP Detail

Summary

• ID
  rs29349397
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117939281 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAGC ATCTCTCCTC CGCCAGCCAG
  S
  CGCTCTGCTC ACTTGCTAGG GGTGG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38586726	mCV24220247	ABI	CRAMUS_MOUSE	f	SNP	C	C	G	C
ss147594632	ENSMUSSNP1035087	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss323501465	CHEV_10_117540432	CHEVERUD	SCREENING_POP	f	SNP					C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29349397					SNP	C	C	G	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117939281 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2246	CpG island 2246	within coordinates
Gm66186	predicted gene, 66186	within coordinates
Rr369079	regulatory region 369079	within coordinates
Tssr3367	transcription start site region 3367	1406 bp downstream
Tssr99497	transcription start site region 99497	94 bp upstream