rs29351953 SNP Detail

Summary

• ID
  rs29351953
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:89622040 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTA TTTATTATTA TAAATAAGTA
  Y
  ACTGTAGCTG TTTTCAGACA CACCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38595843	mCV23617816	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T
ss147262033	ENSMUSSNP6630429	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		T
ss323383237	CHEV_10_89248923	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29351953					SNP	C	C	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:89622040 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Bltp3b	bridge-like lipid transfer protein family member 3B			Intron
				Noncoding-Transcript-Variant
Tssr95182	transcription start site region 95182			337 bp downstream