rs29352161 SNP Detail

Summary

• ID
  rs29352161
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:42753738 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCCTAAGA TGGAGGCAGG
  CTGGTTCTTT ACTATGTAGC TGTACAGTCA GAGCGAACCT TTTAAAACAT GGCAAGGGCT
  GTAGTGTGGC TGTCGTAACA CTTAGAAAAC ACACACAGGG AGAGAGAGAG AGAGAGAGAG
  AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGCGCTCC AGTTGTATCT
  Y
  TGCTCTACTC AGAAATGCCC AGTGGCTCTT CATCCAGCTC AAAAAGAAAA GTGTTTTCAG
  TGACCCAAGA ATAGCAATAC GAGGTCCCCA TTGTCTCCTC TACCTCACTC CCAACCGTGT
  TCCTTCATTT TGTATCTGGC TTGTTAGTTT TGACACACCA AGTCCACAGC TGCCCCAGGG
  ATTTTACCTG TTGTTCTGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss38592724	mCV23303344	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss147084108	ENSMUSSNP2662796	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs29352161					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:42753738 () rs orientation: forward

Symbol	Name	Function Class
Gm66346	predicted gene, 66346	within coordinates
Rr219455	regulatory region 219455	1938 bp distal
Rr222710	regulatory region 222710	272 bp distal
Rr227614	regulatory region 227614	1264 bp proximal
Scml4	Scm polycomb group protein like 4	within coordinates