rs29352508 SNP Detail

Summary

• ID
  rs29352508
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:91909069 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAAC TCTCACCAGT GTGCTGCACC
  R
  AAGCCCTGAA AACTTGATGT AGGAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss38599449	mCV24971743	ABI	CRAMUS_MOUSE	f	SNP		A					G		A
ss50893770	NES14220659	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A		G	A	A		G	A	G		A
ss323389593	CHEV_10_91535952	CHEVERUD	SCREENING_POP	f	SNP											A				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29352508					SNP	A	A	A	A	A	A	G	G	A	A	A	G	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50893770	NES14220659	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:91909069 () rs orientation: forward

Symbol	Name	Function Class
Gm55043	predicted gene, 55043	1392 bp upstream
Gm55044	predicted gene, 55044	1962 bp downstream
Mir135a-2	microRNA 135a-2	1022 bp upstream
Tssr98922	transcription start site region 98922	1103 bp upstream
Tssr98923	transcription start site region 98923	183 bp downstream