rs29354926 SNP Detail

Summary

• ID
  rs29354926
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:5205754 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GGTCAAGTTT CTCTTGTTCT TGCTCCAGCC AACTTTCAAA TGCCTTTAGG TCTCTCTGAT
  ACTCTTGATG AAGGCGGACC AGCTTTTCCA ATTTTGTCAC TGCTTCCTGT CATCGGCATT
  TAAAATGAGT AAGAAAGAAA CATTATCACT GAATGCAGAA TTCACTTTTG GAGTTTAATC
  TTTTTTATGC TTGTTTGTGT GTGTGTGTGT GTGTATGTGT GTGTGTGTGT GAGTGTGTGT
  ATGTGTCTGT GTGTGTGTGT ATGTGTGTGT GTGTGTATGT GTCTGTGTCT GTGTGTGTGT
  S
  TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTTAGCC AGAGGACAAT TTTTTCAGTC
  TGTTCTCTCC TTCCAACTTT GGGGTCTGGA TCAAATTCAA ATTGTCAGGT TCAGTGATAA
  GAACTTTTGC TTGCTGAAAC ATCTTGCGAG CTGCACTTTT GAAGTTTTAG AAAGGCATAA
  TTATTAAATC ATCAGACCAT GAGTCATCAC CTTTTGAAAA GAACCTTTAA GTTTCCTATT
  CAAAAAGAGA ACGCAAGTGG GGGCTAATAG GGAGGATGCG GATGTGGCAA ATACATTCAA
                                                                   
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss38599860	mCV23713771	ABI	CRAMUS_MOUSE	f	SNP	C	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs29354926					SNP	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:5205754 () rs orientation: forward

Symbol	Name	Function Class
Rr227855	regulatory region 227855	1755 bp distal
Rr230259	regulatory region 230259	1002 bp proximal
Syne1	spectrin repeat containing, nuclear envelope 1	within coordinates