rs29355235 SNP Detail

Summary

• ID
  rs29355235
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:8820818 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTCGAGTT TTACAGTAAA
  AACTTCTTTT GGCTTACAAA ATCTTTTTTT TTTTCAGAGC CCTAGAGAAA AATGAGTATC
  TGCATAATTA AATCAATGTC TCGTATATAA TGAATATCAA GTCGCAAAAG AACGCAAAGA
  CCTGGCAACA CAGTTCGAGA CGGAGGCTGC CTGACTCCTT GGAAGTTTCC TCAGTTTCTT
  Y
  CTCACAGAAC GTTCCCCCTC CCCACTGTCC TCTCATGTCT CACAGTGAGA AGGACACCAA
  CCAGAACAAT AAAACAAATC TTAGAACTTG AAAATCCACA GCCTACGTAC CCCGAAGTCT
  TGGTCCTCCA TGGAGAGAGC TGCTCGTGGC TTAGCGAGCC ATACGTTCAA ATGATACTGG
  ACTTCCTCTC TGACTCACGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38600298	mCV23685934	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss146768447	ENSMUSSNP3284358	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
ss323245914	CHEV_10_8664872	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29355235					SNP	T	T	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:8820818 () rs orientation: forward

Symbol	Name	Function Class
Gm48727	predicted gene, 48727	within coordinates
Gm67475	predicted gene, 67475	within coordinates
Rr427431	regulatory region 427431	within coordinates
Rr427432	regulatory region 427432	781 bp proximal
Tssr96665	transcription start site region 96665	161 bp downstream
Tssr96666	transcription start site region 96666	207 bp downstream