rs29356009 SNP Detail

Summary

• ID
  rs29356009
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:93732414 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTAT TCTATGTCCC AACCTCTCTC
  Y
  CTACTCCTCA CACACACACA CCCCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38600759	mCV24979084	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss147372043	ENSMUSSNP4620106	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss323405835	CHEV_10_93359297	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29356009					SNP	T	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:93732414 () rs orientation: forward

Symbol	Name	Function Class
4930471D02Rik	RIKEN cDNA 4930471D02 gene	597 bp upstream
Metap2	methionine aminopeptidase 2	within coordinates
Rr437346	regulatory region 437346	338 bp proximal
Rr437347	regulatory region 437347	872 bp proximal
Tssr95291	transcription start site region 95291	604 bp upstream
Tssr95292	transcription start site region 95292	612 bp upstream