rs29356393 SNP Detail

Summary

• ID
  rs29356393
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:3671551 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCACTTCA AAAGGAAGCC
  AGCCAAGTAG GAAAGCTGCA CGGCAGGTGG CCCCACCTCA GTGGCGACAA GGTCTGCACC
  AGCCTGCTTC AGGCTGGGGA GGCTACACCC TGGAGCTTGA GTAGCAGGTG TTTGTGAGCT
  GCTTGGTGTA AGTACTGAAG AGCAAGTTTG GGTCCTCTGC AAGAACAGGA AACACACTAA
  R
  CTGCTGAGAC TTAATGTACC TGACAGCAGC TTGTTAGACC ACGCATGTGT CCAACATCTG
  GATACTGAAT AGTACTCAGT TTCATAGAAT AACAATATAT GTTACTTTAA GACAGTGGTT
  CTCAACCTTC CCAAGGCTGC GGAATATACT TTAATATGCT TTCTCATGGC AACCCCCAAT
  CATAAAATTA TTTTGTTGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss38601966	mCV25387192	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss146748619	ENSMUSSNP1957259	ENSEMBL	ENSEMBL_Sanger	r	SNP		T
ss323242472	CHEV_10_6624990	CHEVERUD	SCREENING_POP	r	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29356393					SNP	A	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:3671551 () rs orientation: forward

Symbol	Name	Function Class
A330032P22Rik	RIKEN cDNA A330032P22 gene	within coordinates
Gm30164	predicted gene, 30164	within coordinates
Gm56946	predicted gene, 56946	within coordinates
Rr219187	regulatory region 219187	within coordinates
Rr227319	regulatory region 227319	651 bp proximal