rs29356393 SNP Detail

Summary

• ID
  rs29356393
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:3671551 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCACTTCA AAAGGAAGCC
  AGCCAAGTAG GAAAGCTGCA CGGCAGGTGG CCCCACCTCA GTGGCGACAA GGTCTGCACC
  AGCCTGCTTC AGGCTGGGGA GGCTACACCC TGGAGCTTGA GTAGCAGGTG TTTGTGAGCT
  GCTTGGTGTA AGTACTGAAG AGCAAGTTTG GGTCCTCTGC AAGAACAGGA AACACACTAA
  R
  CTGCTGAGAC TTAATGTACC TGACAGCAGC TTGTTAGACC ACGCATGTGT CCAACATCTG
  GATACTGAAT AGTACTCAGT TTCATAGAAT AACAATATAT GTTACTTTAA GACAGTGGTT
  CTCAACCTTC CCAAGGCTGC GGAATATACT TTAATATGCT TTCTCATGGC AACCCCCAAT
  CATAAAATTA TTTTGTTGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss38601966	mCV25387192	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss146748619	ENSMUSSNP1957259	ENSEMBL	ENSEMBL_Sanger	r	SNP		T
ss323242472	CHEV_10_6624990	CHEVERUD	SCREENING_POP	r	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29356393					SNP	A	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:3671551 () rs orientation: forward

Symbol	Name	Function Class
A330032P22Rik	RIKEN cDNA A330032P22 gene	within coordinates
Gm30164	predicted gene, 30164	within coordinates
Gm56946	predicted gene, 56946	within coordinates