rs29356924 SNP Detail

Summary

• ID
  rs29356924
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:40504155 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTCCCACA GAAAAGAACA
  AGGCATAGTT AGAAGGTAGA GACTTTCAGC ATCCTCCCTC AGATTCTAGG GAAGTGAGAT
  GTATAGCCAG TCACATCTGT GGATGTAAGT CAACATAAAT ATCTAAAAGG ACAGGTGTGG
  TGCTTTGAGT ATGTTTGGCC CAGGAAATAG CACTATTAGG AGATGTGGCT TTGTGGGAGA
  W
  GGTGTGGCCT TGTTGTAGGG AGTGTGTCAC TGTGGGTGTG GGCTTTAGGA CTCTCATCCT
  AACTGTCTGA AAGCCAGTCT TCTGTTTGGC TTCAGAAGAA GATGTAGAAC TCTCAGTTCT
  TCCAGAGCCA TACCTGCCTG GATGCTGCCA TGTTTCCCAC CATAATGACT GAACCTCAGA
  ACCTGTAAGC CAGCCCCAGT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38604058	mCV23537551	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	T	T
ss147067325	ENSMUSSNP1368557	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29356924					SNP	A	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:40504155 () rs orientation: forward

Symbol	Name	Function Class
Ddo	D-aspartate oxidase	1852 bp upstream
Rr214674	regulatory region 214674	846 bp proximal
Rr224698	regulatory region 224698	1445 bp proximal
Tssr93026	transcription start site region 93026	1828 bp upstream
Tssr93027	transcription start site region 93027	1898 bp upstream