rs29357240 SNP Detail

Summary

• ID
  rs29357240
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:68132951 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCCTCAACAT AGTCAATTCA GTTCAATTTT GGTGATTTGG
  GAATTTTGCT CGGATTGCCC CTCCCCTATC CCTTTCTTGT CTTTTTCTTT ATACTCATTG
  R
  TCTCCATGAT CTTGGGGTTT TCCAGCTTTG GCACTTGGCT TTTCTCTGTC CCTTACAATT
  GGAGACACAT AGTCACAAAA GTCCCAAGTG CCGAGAGAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	NZW/LacJ	SM/J	WSB/EiJ
ss38604872	mCV23267935	ABI	CRAMUS_MOUSE	f	SNP	A	A					G
ss47874565	NES11950504	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A		G		G
ss147150984	ENSMUSSNP7119085	ENSEMBL	ENSEMBL_Sanger	f	SNP		A					G
ss323352590	CHEV_10_67759869	CHEVERUD	SCREENING_POP	f	SNP									G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	NZW/LacJ	SM/J	WSB/EiJ
rs29357240					SNP	A	A	A	A	A	A	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47874565	NES11950504	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:68132951 () rs orientation: forward

Symbol	Name	Function Class
Gm65979	predicted gene, 65979	688 bp downstream