rs29358057 SNP Detail

Summary

• ID
  rs29358057
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:3671251 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACCGACCTA CATGAACTGG
  GTACTCTTGG AAGGCAGGCT GGGGCTGAAA GAGACTAGAC CTCGAGAGAA AATAATGAGG
  CCAAGACAAG TTTTCTCTGA TCAAGGCCTG TGAGTTTACT AAGAGACTGC TTATAAAGGG
  GGAAGGCCCA CCCTCTCCCT CCCCACCCCC CACACCCCCA GTCCATCCTT GGTGCTTTGT
  Y
  ACCATGCTGT CAGGACTTGG TCGCCAGGCT GTTGCTTATT CAGGAAGACA GGTTCAGCCT
  CTCAGCAGGT AGCAGCATCT CAGAGAAGAG CAGGGCAGTT GTCACTTCAA AAGGAAGCCA
  GCCAAGTAGG AAAGCTGCAC GGCAGGTGGC CCCACCTCAG TGGCGACAAG GTCTGCACCA
  GCCTGCTTCA GGCTGGGGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss38610231	mCV25387210	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss146748633	ENSMUSSNP3902969	ENSEMBL	ENSEMBL_Sanger	r	SNP		A	A
ss323242477	CHEV_10_6625290	CHEVERUD	SCREENING_POP	r	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29358057					SNP	T	T	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:3671251 () rs orientation: forward

Symbol	Name	Function Class
A330032P22Rik	RIKEN cDNA A330032P22 gene	within coordinates
Gm30164	predicted gene, 30164	within coordinates
Gm56946	predicted gene, 56946	within coordinates