rs29359398 SNP Detail

Summary

• ID
  rs29359398
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:13436178 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATTGTTCTT TCTTTTTAGT GCTTGTTTTT CTTTTCAACG
  TTGAGAATGG AAGCCAGGCT CTTGTACTTG CTGCATCTGC TCTGTCCCTG AGCCATAGCC
  K
  TCCTTAGCTT TCAGTTCCTT AATGTGTGGA AACAGCGTTA TGAAATACAC TCTACAATTT
  AGCCAGAAAC AGGAAAACCA GTTTCTACAC AGCAGAGTG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss38604816	mCV23067524	ABI	CRAMUS_MOUSE	f	SNP	G	G				G		T
ss52145429	NES15236923	PERLEGEN	MM_PANEL2	f	SNP		G	G	G	G		T	T	T	T	G
ss146822915	ENSMUSSNP3997301	ENSEMBL	ENSEMBL_Sanger	f	SNP	G							T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs29359398					SNP	G	G	G	G	G	G	T	T	T	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52145429	NES15236923	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:13436178 () rs orientation: forward

Symbol	Name	Function Class
Adat2	adenosine deaminase, tRNA-specific 2	within coordinates
Gm66583	predicted gene, 66583	652 bp downstream