CTTCC TTGTGTCTTC TTTTTCCATT M ATGGGTCTAC AGTTCTTCAA ATACT M = A/C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|
ss38608027 | mCV24971543 | ABI | CRAMUS_MOUSE | f | SNP | A | A | C | A | ||
ss147299081 | ENSMUSSNP381815 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | A | A | |||
ss323389567 | CHEV_10_91533291 | CHEVERUD | SCREENING_POP | f | SNP | C | A | ||||
SNP Consensus Information | |||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
||||
rs29360541 | SNP | A | A | C | A | C | A |
Location: Chr10:91906408 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
D10Mit176 | DNA segment, Chr 10, Massachusetts Institute of Technology 176 | 998 bp distal | ||||||
Gm55043 | predicted gene, 55043 | 1115 bp downstream | ||||||
Mir135a-2 | microRNA 135a-2 | 1540 bp downstream | ||||||
Tssr98922 | transcription start site region 98922 | 1552 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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