rs29360687 SNP Detail

Summary

• ID
  rs29360687
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:7740657 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGCA CTCACAATAG TGGGATTACA
  R
  GTATAAGTGA CTGATGTCCA GCGTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38609363	mCV22668168	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A	G
ss146757858	ENSMUSSNP4528297	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		G
ss323244391	CHEV_10_7584691	CHEVERUD	SCREENING_POP	f	SNP						G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29360687					SNP	G	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:7740657 () rs orientation: forward

Symbol	Name	Function Class
Rr216483	regulatory region 216483	1857 bp distal
Rr223547	regulatory region 223547	1125 bp distal
Rr223550	regulatory region 223550	243 bp distal
Rr223552	regulatory region 223552	within coordinates
Rr384104	regulatory region 384104	within coordinates
Zc3h12d	zinc finger CCCH type containing 12D	within coordinates