rs29361132 SNP Detail

Summary

• ID
  rs29361132
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:127318960 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGTC TGTGAGGGTG TGTTCTATAA
  K
  AACAGGATTT GTGGCAAGGC AGAAG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss38612689	mCV22969179	ABI	CRAMUS_MOUSE	f	SNP		G	T				G		G
ss61334477	NES16949956	PERLEGEN	MM_PANEL2	f	SNP	G		T	G	T	G		G	G	T	G		G	T	G	G		G
ss147732486	ENSMUSSNP4736882	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	T						G
ss323529607	CHEV_10_126920147	CHEVERUD	SCREENING_POP	f	SNP												T					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29361132					SNP	G	G	T	G	T	G	G	G	G	T	G	T	G	T	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61334477	NES16949956	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:127318960 () rs orientation: forward

Symbol	Name	Function Class
R3hdm2	R3H domain containing 2	within coordinates
Rr213570	regulatory region 213570	1560 bp distal
Rr218482	regulatory region 218482	960 bp distal
Rr226475	regulatory region 226475	1641 bp proximal
Tssr96215	transcription start site region 96215	1419 bp downstream
Tssr96216	transcription start site region 96216	1392 bp downstream