rs29361161 SNP Detail

Summary

• ID
  rs29361161
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:3671403 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTCCCTCC CCACCCCCCA
  CACCCCCAGT CCATCCTTGG TGCTTTGTCA CCATGCTGTC AGGACTTGGT CGCCAGGCTG
  TTGCTTATTC AGGAAGACAG GTTCAGCCTC TCAGCAGGTA GCAGCATCTC AGAGAAGAGC
  AGGGCAGTTG TCACTTCAAA AGGAAGCCAG CCAAGTAGGA AAGCTGCACG GCAGGTGGCC
  S
  CACCTCAGTG GCGACAAGGT CTGCACCAGC CTGCTTCAGG CTGGGGAGGC TACACCCTGG
  AGCTTGAGTA GCAGGTGTTT GTGAGCTGCT TGGTGTAAGT ACTGAAGAGC AAGTTTGGGT
  CCTCTGCAAG AACAGGAAAC ACACTAAGCT GCTGAGACTT AATGTACCTG ACAGCAGCTT
  GTTAGACCAC GCATGTGTCC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss38607010	mCV25387200	ABI	CRAMUS_MOUSE	f	SNP	G	G	C
ss146748624	ENSMUSSNP1831963	ENSEMBL	ENSEMBL_Sanger	r	SNP	C	C
ss323242474	CHEV_10_6625138	CHEVERUD	SCREENING_POP	r	SNP				G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29361161					SNP	G	G	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:3671403 () rs orientation: forward

Symbol	Name	Function Class
A330032P22Rik	RIKEN cDNA A330032P22 gene	within coordinates
Gm30164	predicted gene, 30164	within coordinates
Gm56946	predicted gene, 56946	within coordinates
Rr219187	regulatory region 219187	within coordinates
Rr227319	regulatory region 227319	799 bp proximal