rs29362283 SNP Detail

Summary

• ID
  rs29362283
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:12747127 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCAC TTTTCAGATA CTACCCCACC
  Y
  GGGGATCCAT CCCATAATCA GCCAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss38614759	mCV23882725	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss146804333	ENSMUSSNP6008162	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
ss323253708	CHEV_10_12591181	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29362283					SNP	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:12747127 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1301	CpG island 1301	1640 bp distal
Gm66629	predicted gene, 66629	within coordinates
Rr224421	regulatory region 224421	1526 bp distal
Tssr3138	transcription start site region 3138	1896 bp upstream
Tssr96728	transcription start site region 96728	1866 bp upstream
Tssr96729	transcription start site region 96729	1742 bp upstream