rs29362751 SNP Detail

Summary

• ID
  rs29362751
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:44235096 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCTAGTCC TCCCCTTCTC
  TGACCCCCTT TCTTAACCTG CTCTCCCACT GACTCCCCCC ACCCTCACGG TCTTCTGTAG
  CCCCGCCTGG GCTGGAATTC GCTGTGTGAC CTTGAACTCT GGTTCTTTGG TTTCTACCCG
  CTGTATTGCT GGGATTCTGA ATGTGCGCTG CTACAGCCAA CTTGGGCAGT GCTAGAGATC
  W
  CACCTAAGGC ATTGTGCACA CTTAGCAACC TCTCTACCGC ATGACTCTAG CTCAGAGCTC
  ATTTTCATTT TCTCTATAAT ATTTTCATAC CCTAGGAAGG GTGGAGAAAT GAACTAACTT
  CATTGAATAC CTGCTATGTC CAAACCCTCT TGCAGCTTCA ACTGGTCTTG CTGCTGCTGC
  TTCCTCCCCC TCCTCCTCCT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss38621455	mCV23013880	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	T
ss147093285	ENSMUSSNP2869135	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs29362751					SNP	A	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:44235096 () rs orientation: forward

Symbol	Name	Function Class
Atg5	autophagy related 5	within coordinates
Mir1929	microRNA 1929	576 bp upstream
Rr227725	regulatory region 227725	897 bp distal
Tssr93169	transcription start site region 93169	702 bp downstream