rs29364010 SNP Detail

Summary

• ID
  rs29364010
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:105075867 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCCAGTATG ACCACATACT GGGCACCACA TTGCCAGTCA
  AAGCTAAATA TAAAACTCTG CAGTGTTCCT AATCATCTAG ACTGGTTTCA TTATTTCAAC
  M
  TTTGATCACT GGAGATACAC TACAAAAGGT CAATCCATTT TCAACATAAA TTCTGCAGTA
  CAATATGCTT TGGGAGAATA AAAATTACAG GGCATAATA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38615875	mCV24202122	ABI	CRAMUS_MOUSE	f	SNP	A	C	A	C
ss147491421	ENSMUSSNP1704375	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C		C
ss323446512	CHEV_10_104677062	CHEVERUD	SCREENING_POP	f	SNP					C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29364010					SNP	A	C	A	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:105075867 () rs orientation: forward

Symbol	Name	Function Class
Rr212535	regulatory region 212535	1267 bp distal
Tmtc2	transmembrane and tetratricopeptide repeat containing 2	within coordinates
Tssr95614	transcription start site region 95614	1849 bp downstream
Tssr95615	transcription start site region 95615	1490 bp downstream