rs29365200 SNP Detail

Summary

• ID
  rs29365200
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:3671498 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACAGGTTCA GCCTCTCAGC
  AGGTAGCAGC ATCTCAGAGA AGAGCAGGGC AGTTGTCACT TCAAAAGGAA GCCAGCCAAG
  TAGGAAAGCT GCACGGCAGG TGGCCCCACC TCAGTGGCGA CAAGGTCTGC ACCAGCCTGC
  TTCAGGCTGG GGAGGCTACA CCCTGGAGCT TGAGTAGCAG GTGTTTGTGA GCTGCTTGGT
  R
  TAAGTACTGA AGAGCAAGTT TGGGTCCTCT GCAAGAACAG GAAACACACT AAGCTGCTGA
  GACTTAATGT ACCTGACAGC AGCTTGTTAG ACCACGCATG TGTCCAACAT CTGGATACTG
  AATAGTACTC AGTTTCATAG AATAACAATA TATGTTACTT TAAGACAGTG GTTCTCAACC
  TTCCCAAGGC TGCGGAATAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss38623317	mCV25387198	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss146748621	ENSMUSSNP5927696	ENSEMBL	ENSEMBL_Sanger	r	SNP	T	T
ss323242473	CHEV_10_6625043	CHEVERUD	SCREENING_POP	r	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29365200					SNP	A	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:3671498 () rs orientation: forward

Symbol	Name	Function Class
A330032P22Rik	RIKEN cDNA A330032P22 gene	within coordinates
Gm30164	predicted gene, 30164	within coordinates
Gm56946	predicted gene, 56946	within coordinates
Rr219187	regulatory region 219187	within coordinates
Rr227319	regulatory region 227319	704 bp proximal