rs29365642 SNP Detail

Summary

• ID
  rs29365642
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:3671252 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCGACCTAC ATGAACTGGG
  TACTCTTGGA AGGCAGGCTG GGGCTGAAAG AGACTAGACC TCGAGAGAAA ATAATGAGGC
  CAAGACAAGT TTTCTCTGAT CAAGGCCTGT GAGTTTACTA AGAGACTGCT TATAAAGGGG
  GAAGGCCCAC CCTCTCCCTC CCCACCCCCC ACACCCCCAG TCCATCCTTG GTGCTTTGTC
  R
  CCATGCTGTC AGGACTTGGT CGCCAGGCTG TTGCTTATTC AGGAAGACAG GTTCAGCCTC
  TCAGCAGGTA GCAGCATCTC AGAGAAGAGC AGGGCAGTTG TCACTTCAAA AGGAAGCCAG
  CCAAGTAGGA AAGCTGCACG GCAGGTGGCC CCACCTCAGT GGCGACAAGG TCTGCACCAG
  CCTGCTTCAG GCTGGGGAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss38624552	mCV25387209	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss146748630	ENSMUSSNP6017451	ENSEMBL	ENSEMBL_Sanger	r	SNP		C	C
ss323242476	CHEV_10_6625289	CHEVERUD	SCREENING_POP	r	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29365642					SNP	G	G	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:3671252 () rs orientation: forward

Symbol	Name	Function Class
A330032P22Rik	RIKEN cDNA A330032P22 gene	within coordinates
Gm30164	predicted gene, 30164	within coordinates
Gm56946	predicted gene, 56946	within coordinates
Rr219187	regulatory region 219187	within coordinates
Rr227319	regulatory region 227319	950 bp proximal