rs29368961 SNP Detail

Summary

• ID
  rs29368961
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:7208413 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTATT CTATTCCAAT TCCATAGCTA
  Y
  AGTTTGGATT GTTTTTTTTT TTTAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	NZW/LacJ	SM/J	WSB/EiJ
ss38627412	mCV25378359	ABI	CRAMUS_MOUSE	f	SNP		C	C				T		C
ss52047061	NES15060606	PERLEGEN	MM_PANEL2	r	SNP	G		G	G	G	G		A		G		G		A
ss146638867	ENSMUSSNP2743533	ENSEMBL	ENSEMBL_Sanger	r	SNP			G						G
ss323236202	CHEV_10_3088128	CHEVERUD	SCREENING_POP	r	SNP											G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	NZW/LacJ	SM/J	WSB/EiJ
rs29368961					SNP	C	C	C	C	C	C	T	T	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52047061	NES15060606	PERLEGEN	MM_PANEL	r	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:7208413 () rs orientation: forward

Symbol	Name	Function Class
Rr220267	regulatory region 220267	1788 bp proximal