rs29369088 SNP Detail

Summary

• ID
  rs29369088
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:82326984 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATTT GATAGACAAA AGAAAATTCA
  W
  ATTTAAGATA CAATATTATT TTGAG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38631876	mCV23602891	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	T	A
ss147186351	ENSMUSSNP3560345	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		A
ss323364267	CHEV_10_81953895	CHEVERUD	SCREENING_POP	f	SNP						A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29369088					SNP	A	A	A	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:82326984 () rs orientation: forward

Symbol	Name	Function Class
Gm1553	predicted gene 1553	within coordinates
Tssr98669	transcription start site region 98669	1390 bp downstream
Tssr98670	transcription start site region 98670	1462 bp downstream
Tssr98671	transcription start site region 98671	1492 bp downstream