rs29369656 SNP Detail

Summary

• ID
  rs29369656
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:7740241 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAAG CCAGCTGTGT GGCTGGAGCC
  R
  AACCCTGGAG TCTGCACTGG GTCAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss38628159	mCV22668360	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss146757853	ENSMUSSNP6758778	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss323244389	CHEV_10_7584275	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29369656					SNP	G	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:7740241 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1279	CpG island 1279	1825 bp distal
Rr216483	regulatory region 216483	1441 bp distal
Rr223547	regulatory region 223547	709 bp distal
Rr223550	regulatory region 223550	within coordinates
Rr223552	regulatory region 223552	262 bp proximal
Rr384104	regulatory region 384104	210 bp upstream
Zc3h12d	zinc finger CCCH type containing 12D	within coordinates