rs29369758 SNP Detail

Summary

• ID
  rs29369758
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:44235325 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CGCTGTGTGA CCTTGAACTC TGGTTCTTTG GTTTCTACCC GCTGTATTGC TGGGATTCTG
  AATGTGCGCT GCTACAGCCA ACTTGGGCAG TGCTAGAGAT CACACCTAAG GCATTGTGCA
  CACTTAGCAA CCTCTCTACC GCATGACTCT AGCTCAGAGC TCATTTTCAT TTTCTCTATA
  ATATTTTCAT ACCCTAGGAA GGGTGGAGAA ATGAACTAAC TTCATTGAAT ACCTGCTATG
  TCCAAACCCT CTTGCAGCTT CAACTGGTCT TGCTGCTGCT TCCTCCCCCT CCTCCTCCTC
  Y
  TCCTCCTCCT CCTCCTCCTT CTTCTTCTTC ATTTATATAG TGTATGTGAG TACACTGTAG
  CTGTCTTCAG ACACACCAGG GGGTATCAGA TCACATTGAA GATGGTTTGT GAGCCACCTA
  TGGTTGCTGG GAATTGAACT CTTTATCACT GAGCCATCTC CCCAACCCCT GGGCTTGCTT
  TTTCAATTTT TCTTTTATTC TTCGAGGAGC CGTAGAGATG AGTGTTTACT CACTCTCTAA
  GATGAGGAAC TGGAGGCGCA TTCAGCTAGA TTCTAAGCTA GTAAATGTTG ATGGCCGACG
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J
ss38629574	mCV23013881	ABI	CRAMUS_MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J
rs29369758					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:44235325 () rs orientation: forward

Symbol	Name	Function Class
Atg5	autophagy related 5	within coordinates
Mir1929	microRNA 1929	347 bp upstream
Rr227725	regulatory region 227725	1126 bp distal
Tssr93169	transcription start site region 93169	931 bp downstream