rs29370372 SNP Detail

Summary

• ID
  rs29370372
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:105075351 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCCATAAAC AAGTCGGCCC TGAAAACCCA AGCCCTGGTA
  ATTTTGCCCT CTGGACTCCA GAGTGAATAA GAAGTTAAAT AAAGGTAGGT GACATTGTAC
  Y
  ATGCAAATTT CCCATTCATC ACATTAAATC TTTTATCCTT AAGATAATGC AGACTTTGGC
  ATCATTCCCA ATCAAAGAAC AAAGTAGTTC CCTTTAAAT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss38630389	mCV24201853	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss147491418	ENSMUSSNP703338	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss323446511	CHEV_10_104676546	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29370372					SNP	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:105075351 () rs orientation: forward

Symbol	Name	Function Class
Rr212535	regulatory region 212535	751 bp distal
Tmtc2	transmembrane and tetratricopeptide repeat containing 2	within coordinates
Tssr95614	transcription start site region 95614	1333 bp downstream
Tssr95615	transcription start site region 95615	974 bp downstream