rs29370531 SNP Detail

Summary

• ID
  rs29370531
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:86287545 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGACAAGAT GACACTGAAA ATGAACTACC ACCATGACTA
  GAGTTAGCAA ACATTTAAAT ACAATATTTG CATCCCTTCT TTGATGACTA CAGCTCATAA
  R
  GACACATCCA GACTGTAGCA GCATGGCAAT GGCCAGCGTG GTCTTTACTC TTAATTCCCA
  TTCTTCCCTA GTTCTCAGTT ACTCTCCTCT CTCCATTCT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss38631748	mCV23609854	ABI	CRAMUS_MOUSE	f	SNP		G	G				G		A
ss47923717	NES12028022	PERLEGEN	MM_PANEL2	f	SNP	G		G	G	G	G		G	A	G	G		G	G	G		A
ss147219926	ENSMUSSNP6233331	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G						A
ss323373939	CHEV_10_85914426	CHEVERUD	SCREENING_POP	f	SNP												G				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29370531					SNP	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47923717	NES12028022	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:86287545 () rs orientation: forward

Symbol	Name	Function Class
Rr217202	regulatory region 217202	56 bp proximal
Rr229241	regulatory region 229241	352 bp proximal
Syn3	synapsin III	within coordinates