rs29371741 SNP Detail

Summary

• ID
  rs29371741
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:64521866 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AGCAGCCAAT GTAAAGGAAC AGAAGAAGCA CTGTCTCCCC AGCTTCGAAG ACTCATGGAG
  CCTGTTCCAG AGTATCACAT GTCCCTGATG ACAGAAGATT TGAATGTTAC AGGGACAGAA
  GAAATTGCTA GTCAAAGCTT CAGTAGGAGA TGGAATTGCA AAGAGATAGT AGCTCACCAG
  TTAATACACA GAGATCATTT TTCTCCGTCA GAGGCTGTTT CTGTATCGCA TCAGATGCTT
  CAGATTGTAA CTGCTAAAGA GTCATATCAA TCACAGAAGA CTGAAGCTTG TTATGATAGT
  R
  TTAACACAAT CAAGAGACCT CAAGTCTGCT CTCATATGGA TTCCATAGTG GCTATAGAGT
  CTCAATTCTC TCCTTTAAAT ACACTGTGAC ATCATGTTTG GTTACAAAAG TAGGGGTTAC
  CCACACTTTT CTTAGTTCAT TCAGTTTAGC GGACCTTCTG GCTCTTACCT TCTCCTCCTC
  CTTTCTGTCT CCTCTCTATT TTCCCTTGTG GTGTCTTAAA TAAGAAAGGT CCCACAAAGG
  CTCATATATT TGAACTCTTA GTCCTGCTGG TGGTGCTGGC TGGGAAACTT AAAAACCTTA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38632217	mCV24514676	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29371741					SNP	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:64521866 () rs orientation: forward

Symbol	Name	Function Class
Ctnna3	catenin alpha 3	within coordinates
Tssr93785	transcription start site region 93785	382 bp upstream