rs29373442 SNP Detail

Summary

• ID
  rs29373442
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:120070503 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCAT CCTTAATGGG ATCTGATGCC
  Y
  TCTTCTGGTG GGTCTGAAGA CAGCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38638740	mCV24603268	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss147625607	ENSMUSSNP2765650	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss323509309	CHEV_10_119671654	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29373442					SNP	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:120070503 () rs orientation: forward

Symbol	Name	Function Class
Rr385393	regulatory region 385393	368 bp downstream
Rr439963	regulatory region 439963	302 bp distal
Rr439964	regulatory region 439964	403 bp distal
Rr439965	regulatory region 439965	within coordinates