rs29373472 SNP Detail

Summary

• ID
  rs29373472
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:10220088 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTCATCAAC AATGACCTTT
  CACCAACAGG GAAACTATGT TCACAGAACT GGTTAAGGTG GTTGGTTTGG CCGGAAGGGT
  GTGGCTATTA ACATGGTGAC AGAAGAAGAC AAGAGGACTC TCTGAGACAT TGAGACTTTC
  TACAACACCT CCATTGAAGA GATGCCCCTC AACCTTGCTG ACCTCATTTG AGGGGCTGTC
  M
  TGCTTGCTGG CTCTAGCCCA GTGTGCAGTC GGGGGTTGGG GGGCAAGGAA CACCTGGAGC
  TTGGAGGGAA GGGAGCCAAG GGATAGATAT CTTGTCTTTT GTTTGCTTGT TTGTTTGTTT
  TGCTCTTTCT CTCTCTGTCA CTTTTTGAGG GAAAAAAAAA AAACAAAACC TCAGGTTGAT
  TGACACAAAT CTAATTTAAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38637529	mCV25253298	ABI	CRAMUS_MOUSE	f	SNP	C	A	C	C
ss146782243	ENSMUSSNP4682916	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29373472					SNP	C	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:10220088 () rs orientation: forward

Symbol	Name	Function Class
Adgb	androglobin	within coordinates
Gm15568	predicted gene 15568	17 bp downstream
Rr221322	regulatory region 221322	90 bp distal
Tssr92346	transcription start site region 92346	1243 bp downstream
Tssr96688	transcription start site region 96688	389 bp downstream