rs29373672 SNP Detail

Summary

• ID
  rs29373672
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:123032443 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCGAGGAGG AGCGGCGCGA CCGGGATCTG TCAAAAAAAA
  AAAAAAAAAA AAAAAAAAAA AAAAAAAAAC CAGCGGCAGG CAGGCTCACG CCGAGCCACT
  R
  CACCCGGGCT CCGCCAAGGC CCCAAGTGGG AGCGGCACTG CCGGAGGGAG GAGGACCCGG
  AGCCCCGCGA GCCCCGGCCG CCGCTTCCGC GCAGCCCCG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss38638295	mCV23574769	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29373672					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:123032443 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2311	CpG island 2311	within coordinates
Gm4129	predicted gene 4129	within coordinates
Gm55025	predicted gene, 55025	338 bp downstream
Rr224370	regulatory region 224370	within coordinates
Rr402316	regulatory region 402316	1339 bp downstream
Tssr99665	transcription start site region 99665	70 bp upstream
Tssr99666	transcription start site region 99666	378 bp downstream
Tssr99667	transcription start site region 99667	434 bp downstream
Tssr99668	transcription start site region 99668	438 bp downstream
Usp15	ubiquitin specific peptidase 15	within coordinates