rs29374147 SNP Detail

Summary

• ID
  rs29374147
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:127316831 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGCA GCGTCTCCAT GTTCCTTCCC
  Y
  CTCCCTCCTG ACCACTCTCC TAGCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss38635828	mCV22969183	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
ss147732465	ENSMUSSNP3380384	ENSEMBL	ENSEMBL_Sanger	f	SNP		C				T
ss323529604	CHEV_10_126918018	CHEVERUD	SCREENING_POP	f	SNP					C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs29374147					SNP	T	C	T	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:127316831 () rs orientation: forward

Symbol	Name	Function Class
R3hdm2	R3H domain containing 2	within coordinates
Rr213569	regulatory region 213569	1231 bp distal
Rr213570	regulatory region 213570	170 bp proximal
Rr218482	regulatory region 218482	within coordinates
Rr221959	regulatory region 221959	1457 bp distal
Tssr96215	transcription start site region 96215	685 bp upstream
Tssr96216	transcription start site region 96216	728 bp upstream