rs29375098 SNP Detail

Summary

• ID
  rs29375098
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:44024618 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTCAGCTG CAGGTGCAGA
  CTTAAGAAAG TCAAAACTAA GGTCCCATGA ATGAGACTCT AGAGTACAGG CTGAGGGTCC
  TGGACCCTGT GGTATAGTTT CGGGGCGGGA CGAACTTTGC AAAACCGGCT GAGCCACGGA
  GCAGGAGGGG ATCGGAACAC TCAGCGCTTA CCTGGTCTCC CCGAAAGCCC CGGGCGGGTG
  W
  GGGATAAACA CCCCACAGCT GGACGATGGA GACTGCTTCT TCTTGGAGCG CCAGATATGG
  AAGGTGGGGT GTTTCTTGGG GGCCTTGGAC GGGCTGGCCT CCCTGGGGTC GCCCTGCGAT
  GGTGGCGACA ACGGCATCTC CTCTTGTGCC TCTTCTGCGG GCTCAGACTC AGTCCTCCCC
  GGGGCCCAGC GGTGCTGGAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38639501	mCV22330694	ABI	CRAMUS_MOUSE	f	SNP	T	A	A	A
ss147091248	ENSMUSSNP3985198	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29375098					SNP	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:44024618 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1509	CpG island 1509	within coordinates
Crybg1	crystallin beta-gamma domain containing 1	within coordinates
Gm67081	predicted gene, 67081	within coordinates
Rr430916	regulatory region 430916	221 bp proximal
Rr430917	regulatory region 430917	340 bp proximal
Rr430918	regulatory region 430918	423 bp proximal
Tssr97502	transcription start site region 97502	165 bp downstream
Tssr97503	transcription start site region 97503	194 bp downstream
Tssr97504	transcription start site region 97504	225 bp downstream
Tssr97505	transcription start site region 97505	319 bp downstream
Tssr97506	transcription start site region 97506	340 bp downstream