rs29375475 SNP Detail

Summary

• ID
  rs29375475
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:20187813 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCGAA GCCACTCGGC AGAGACTGCC
  Y
  TGTAACTGTC ATGTTAGGCG TCCGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss38642653	mCV23822304	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss146937453	ENSMUSSNP6442978	ENSEMBL	ENSEMBL_Sanger	f	SNP		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs29375475					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:20187813 () rs orientation: forward

Symbol	Name	Function Class
4933406P04Rik	RIKEN cDNA 4933406P04 gene	within coordinates
Bclaf1	BCL2-associated transcription factor 1	84 bp upstream
Cpgi1349	CpG island 1349	within coordinates
D10Csu2	DNA segment, Chr 10, Central Connecticut State University 2	within coordinates
Gm67769	predicted gene, 67769	within coordinates
Tssr92593	transcription start site region 92593	296 bp upstream
Tssr92594	transcription start site region 92594	394 bp upstream
Tssr92595	transcription start site region 92595	431 bp upstream
Tssr92596	transcription start site region 92596	457 bp upstream
Tssr92597	transcription start site region 92597	888 bp upstream
Tssr96944	transcription start site region 96944	172 bp downstream