rs29375796 SNP Detail

Summary

• ID
  rs29375796
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:7504314 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTGC TACCATGCCT GAAGGTCAGA
  R
  AACAATCTGC AGGTGTCAGC TGTCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss38642873	mCV25377489	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29375796					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:7504314 () rs orientation: forward

Symbol	Name	Function Class
Pcmt1	protein-L-isoaspartate (D-aspartate) O-methyltransferase 1	823 bp downstream
Rr220299	regulatory region 220299	within coordinates
Rr220302	regulatory region 220302	1487 bp proximal
Tssr92302	transcription start site region 92302	771 bp upstream