rs29378711 SNP Detail

Summary

• ID
  rs29378711
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:3441594 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTAGAGGGA TCAGCCAATA
  AGCTTTCCTT CCCAGACATT CCTCAAAAGG TATTTAATCT CAAGCCCACC CTGAGAAGTG
  GGGCATGGTT TTACACATCC ACTTTCTGCC ATGATAATAA ATGCCTTAAA ACCATGGGCT
  ATCTCTTTTC ATTAGAATCT GCCATGGGGA GCCATGGAGA AGGCCTTTGT CTTTAGACCC
  R
  GTAAGGCCTC TCTGTGCTCC CAGCCACAGC TGCTACCAAG CCCAAGCCCA AGCCAAGGAC
  TATCCCCAAG GGACCAGCCA GAACTTTCCC CCTTACCTCA CCCCAACCCC AGCCATAGGT
  CAGATCCAGC CTGCGGGGGA TGGGGGAGGC ACTACATTCT CAGCTCTTCC ATGACATCCA
  TCTCCTGGAT GTCCAAGAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38648506	mCV27573924	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss146750966	ENSMUSSNP12461	ENSEMBL	ENSEMBL_Sanger	r	SNP	T	T		C
ss323243170	CHEV_10_6854947	CHEVERUD	SCREENING_POP	r	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29378711					SNP	A	A	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:3441594 () rs orientation: forward

Symbol	Name	Function Class
Gm66845	predicted gene, 66845	within coordinates
Rr222535	regulatory region 222535	1209 bp distal