rs29379551 SNP Detail

Summary

• ID
  rs29379551
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:25758054 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACAG CCAGCAGCAG CTACTATGAT
  R
  CTGACTAACT CAGACCAAAG CTTTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38650573	mCV25109221	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss147013847	ENSMUSSNP654710	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
ss323277627	CHEV_10_25601962	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29379551					SNP	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:25758054 () rs orientation: forward

Symbol	Name	Function Class
Gm47930	predicted gene, 47930	1517 bp upstream
Gm66740	predicted gene, 66740	within coordinates
Rr218979	regulatory region 218979	747 bp proximal
Rr218980	regulatory region 218980	1147 bp proximal