rs29382519 SNP Detail

Summary

• ID
  rs29382519
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:7017662 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAGG AATGGGGGGT ATGGAATTCT
  Y
  CTAAGCAGCC CTGAGGGCTG AAGGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38653119	mCV27567842	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	C	T
ss146641802	ENSMUSSNP3353288	ENSEMBL	ENSEMBL_Sanger	r	SNP			G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29382519					SNP	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:7017662 () rs orientation: forward

Symbol	Name	Function Class
Rr427162	regulatory region 427162	1115 bp proximal
Rr427163	regulatory region 427163	1139 bp proximal
Rr427164	regulatory region 427164	1561 bp proximal
Rr427165	regulatory region 427165	1636 bp proximal