rs29382704 SNP Detail

Summary

• ID
  rs29382704
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:3672806 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAGGGAAT CAAACTGATT
  TAGGGGAGAA TGATCATTTG GGGGAAGCAG TGCTTGGCCC CCCTGGCTGA AAGCACAGTG
  TCCCATTCAC TGAGCTGATC CTAAAAGGAC TCAAAAAGCA GCTACTGCAA TTTAGGGCCA
  GTTGATGGAT TTAAGGGCTG CTGGCTCTTT GTTGAAATGC ATATTAATAA AGAAGAGGGC
  W
  TTATAAAAAC TCACTGTTGC GTACAGGGAT CCACAAGGGA TCACAGTGCA ATGATTATTA
  TATTCACACA ACTAAAGAGG TAGGTAGAGT GGGTTCCCTT GTGTTGGGCT TTGCATTCTT
  AAAAGGAAGT AGGCTTTGGA AGAACTTATC CATAAAATCT GCAGAATGAA CTCAACGCCA
  GCAATTAGAT TTAAGCCATC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38656345	mCV25387155	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	T
ss146748578	ENSMUSSNP5992624	ENSEMBL	ENSEMBL_Sanger	r	SNP				A
ss323242458	CHEV_10_6623735	CHEVERUD	SCREENING_POP	r	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29382704					SNP	A	A	T	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:3672806 () rs orientation: forward

Symbol	Name	Function Class
A330032P22Rik	RIKEN cDNA A330032P22 gene	within coordinates
Gm30164	predicted gene, 30164	within coordinates
Gm56946	predicted gene, 56946	within coordinates
Rr219187	regulatory region 219187	1206 bp distal
Rr227319	regulatory region 227319	within coordinates