rs29385267 SNP Detail

Summary

• ID
  rs29385267
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:121280255 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGTTGACT ATAATAAGCT
  CTAATTACAA GATATGGCTG CCAGTCTAGA ATAGGTAATT GAGATAGGGT TTTTCGAGAC
  AGGGTTTCCC TGAGTAGCCC TTTCTGTCCT GAAACTGGCT TTGTAGATCA GGCTGGTCTT
  GAGATCTGCC TGCCTCTGCC TCCTGAGTGT GGTATTAAAG ACATCGGCCA CCACTACCCA
  R
  CTAGAATGGA TGGTCTCGCT GAGCCATTTT TGACTCAGAA TACTATCTTT GACTCAAGAT
  TACACTGTTG CTAACCAAGA ATACCTGAGC TGTAATTATT TCAGAGGACC ATGACATGGC
  AACAATCGCC CACACAGAAA AACCTTCCTT AGAGAGAGCG CTTTAGAATG TCTGAGTCCA
  GACAGCCTTT CCCTATTGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38662681	mCV24693208	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G	G
ss132911620	ENSMUSSNP4593132	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29385267					SNP	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:121280255 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4344	CpG island 4344	907 bp distal
Rab40b	Rab40B, member RAS oncogene family	1178 bp upstream
Tssr112458	transcription start site region 112458	1162 bp upstream