rs29385317 SNP Detail

Summary

• ID
  rs29385317
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:73478058 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATATAACAG TAGTAGGTTT
  TGACCTAGGA CTTAGGGTTT CACCAGCCAT GGATTCTTGG CCAGGAATTA GACCTGAGTC
  TCTTCCTGGT CAGTGGGCCT TAAATCCAAT CAGAAATCTG TTGGTTACTT CCATAATCTT
  TTGGCAAGTA TTGCACCAAT GCCATATCTC ACTAGATATA TCATTATCAT AGCTTTCAAG
  Y
  TTCATATATA AATACAGAAA TTTGAAGGCT AAATAAAAAT TAAAAGCAAT GTTAAAAACC
  TTAATTTTGT ACTGCTTCCT TCTTCTTTCT ATGGTTTTGG GGAAATAACT TTACATGGCT
  GCTGGCCAAT AGTTTTACGA AAAGAAAAAT GGTACAAATG ACACTGTCTT GCAAGAGGAT
  CACAAATGTT TGTTCAGGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38665667	mCV25082723	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
ss132425523	ENSMUSSNP3890293	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		T
ss323746734	CHEV_11_73400734	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29385317					SNP	T	C	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:73478058 () rs orientation: forward

Symbol	Name	Function Class
Or1e26	olfactory receptor family 1 subfamily E member 26	1566 bp downstream